2012年5月6日 星期日

CSB Core Lab

Link 

ACCESS: Surface Accessibility 


Description (has some specifics for use in the CSB Core Lab)


DEFINE_S: Define Protein Secondary Structure

http://www.csb.yale.edu/download/volume/volume.tar.Z

http://www.csb.yale.edu/download/access/access_irix5.tar.Z

DDMP: Difference Distance Matrix Plot

2005.05.31 -- download the current version of ddmp from: http://roselab.jhu.edu/ddmp/.
Description (has some specifics for use in the CSB Core Lab)
http://www.csb.yale.edu/download/define_s/dfnstruc_v2.tar.Z


OS: Occluded Surface and Packing Analysis

Description (has some specifics for use in the CSB Core Lab and is for version 6)

Version 72.2 uses SIMS for the dot surfacing and includes an expanded atom radii list.
Version 72.3 (April 9, 2003) contains a bugfix. It is available at http://www.csb.yale.edu/download/os/os_v72.3.tar.gz

VOLUME : Residue Voronoi Volumes

(Requires ACCESS above).
Description (has some specifics for use in the CSB Core Lab)


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